free research papers-blue brain group
2011
Romand, S., Wang, Y., Toledo-Rodriguez, M., & Markram, H. (2011). Morphological development of thick-tufted layer V pyramidal cells in the rat somatosensory cortex. [Original Research]. Frontiers in Neuroanatomy, 5.
Anastassiou A.C., Perin R., Markram H. & Koch C., (2011), Ephaptic coupling of cortical neurons, Nature Neuroscience, 14:2 p 217
Perin R., Berger T.K., & Markram H. (2011) A synaptic organizing principle for cortical neuronal groups, PNAS, 108 (12)
2009
King, J. G., Hines, M., Hill, S., Goodman, P. H., Markram, H., & Schurmann, F. (2009). A Component-Based Extension Framework for Large-Scale Parallel Simulations in NEURON. Front Neuroinformatics, 3, 10.
Berger, T. K., Perin, R., Silberberg, G., & Markram, H. (2009). Frequency-dependent disynaptic inhibition in the pyramidal network: a ubiquitous pathway in the developing rat neocortex. J Physiol, 587(Pt 22), 5411-5425.
2008
Markram, H. (2008). Fixing the location and dimensions of functional neocortical columns. HFSP Journal, 2(3), 132-135.
Druckmann, S., Berger, T. K., Hill, S., Schurmann, F., Markram, H., & Segev, I. (2008). Evaluating automated parameter constraining procedures of neuron models by experimental and surrogate data. Biol Cybern, 99(4-5), 371-379.
Ascoli, G. A., Alonso-Nanclares, L., Anderson, S. A., Barrionuevo, G., Benavides-Piccione, R., Burkhalter, A., et al. (2008). Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex. Nat Rev Neurosci, 9(7), 557-568.
Köndgen, H., Geisler, C., Fusi, S., Wang, X.-J., Lüscher, H.-R., & Giugliano, M. (2008). The Dynamical Response Properties of Neocortical Neurons to Temporally Modulated Noisy Inputs In Vitro. Cerebral Cortex, 18(9), 2086-2097.
Hines, M. L., Eichner, H., & Schurmann, F. (2008). Neuron splitting in compute-bound parallel network simulations enables runtime scaling with twice as many processors. J Comput Neurosci, 25(1), 203-210.
Calì, C., Berger, T., Pignatelli, M., Carleton, A., Markram, H., & Giugliano, M. (2008). Inferring connection proximity in networks of electrically coupled cells by subthreshold frequency response analysis. Journal of Computational Neuroscience, 24(3), 330-345.
Hines, M. L., Markram, H., & Schurmann, F. (2008). Fully implicit parallel simulation of single neurons. J Comput Neurosci, 25(3), 439-448.
Kozloski, J., Sfyrakis, K., Hill, S., Schurmann, F., Peck, C., & Markram, H. (2008). Identifying, Tabulating, and Analyzing Contacts between Branched Neuron Morphologies. IBM Journal of Research and Development, 52(1/2), 43-55.
2007
Arsiero, M., Lüscher, H.-R., Lundstrom, B. N., & Giugliano, M. (2007). The Impact of Input Fluctuations on the Frequency–Current Relationships of Layer 5 Pyramidal Neurons in the Rat Medial Prefrontal Cortex. The Journal of Neuroscience, 27(12), 3274-3284.
Le Be, J. V., Silberberg, G., Wang, Y., & Markram, H. (2007). Morphological, electrophysiological, and synaptic properties of corticocallosal pyramidal cells in the neonatal rat neocortex. Cereb Cortex, 17(9), 2204-2213.
Silberberg, G., & Markram, H. (2007). Disynaptic inhibition between neocortical pyramidal cells mediated by Martinotti cells. Neuron, 53(5), 735-746.
Markram, H. (2007). Bioinformatics: industrializing neuroscience. Nature, 445(7124), 160-161.
Druckmann, S., Banitt, Y., Gidon, A., Schurmann, F., Markram, H., & Segev, I. (2007). A novel multiple objective optimization framework for constraining conductance-based neuron models by experimental data. Front Neurosci, 1(1), 7-18.
2006
Berger, T., Lüscher, H. R., & Giugliano, M. (2006). Transient rhythmic network activity in the somatosensory cortex evoked by distributed input in vitro. [doi: DOI: 10.1016/j.neuroscience.2006.03.003]. Neuroscience, 140(4), 1401-1413.
Markram, H. (2006). The Blue Brain Project. Nature Reviews Neuroscience, 7(February 2006), 153-160.
Le Bé, J.-V., & Markram, H. (2006). Spontaneous and evoked synaptic rewiring in the neonatal neocortex. Proceedings of the National Academy of Sciences, 103(35), 13214-13219.
Migliore, M., Cannia, C., Lytton, W. W., Markram, H., & Hines, M. L. (2006). Parallel network simulations with NEURON. J Comput Neurosci, 21(2), 119-129.
Wang, Y., Markram, H., Goodman, P. H., Berger, T. K., Ma, J., & Goldman-Rakic, P. S. (2006). Heterogeneity in the pyramidal network of the medial prefrontal cortex. [10.1038/nn1670]. Nat Neurosci, 9(4), 534-542.
Le Be, J. V., & markram, H. (2006). [A new mechanism for memory: neuronal networks rewiring in the young rat neocortex]. Med Sci (Paris), 22(12), 1031-1033.
2005
Muhammad, A. J., & Markram, H. (2005). NEOBASE: databasing the neocortical microcircuit. Stud Health Technol Inform, 112, 167-177.
Maciokas, J. B., Goodman, P., Kenyon, J., Toledo-Rodriguez, M., & Markram, H. (2005). Accurate dynamical models of interneuronal GABAergic channel physiologies. [doi: DOI: 10.1016/j.neucom.2004.10.083]. Neurocomputing, 65-66, 5-14.
Kalisman, N., Silberberg, G., & Markram, H. (2005). The neocortical microcircuit as a tabula rasa. Proc Natl Acad Sci U S A, 102(3), 880-885.
Silberberg, G., Grillner, S., LeBeau, F. E. N., Maex, R., & Markram, H. (2005). Synaptic pathways in neural microcircuits. [doi: DOI: 10.1016/j.tins.2005.08.004]. Trends in Neurosciences, 28(10), 541-551.
Richardson, M. J. E., Melamed, O., Silberberg, G., Gerstner, W., & Markram, H. (2005). Short-Term Synaptic Plasticity Orchestrates the Response of Pyramidal Cells and Interneurons to Population Bursts. Journal of Computational Neuroscience, 18(3), 323-331.
Toledo-Rodriguez, M., Goodman, P., Illic, M., Wu, C., & Markram, H. (2005). Neuropeptide and calcium-binding protein gene expression profiles predict neuronal anatomical type in the juvenile rat. The Journal of Physiology, 567(2), 401-413.
Grillner, S., Markram, H., De Schutter, E., Silberberg, G., & LeBeau, F. E. N. (2005). Microcircuits in action from CPGs to neocortex. Trends in neurosciences, 28(10), 525-533.
2004
Markram, H., Toledo-Rodriguez, M., Wang, Y., Gupta, A., Silberberg, G., & Wu, C. (2004). Interneurons of the neocortical inhibitory system. [10.1038/nrn1519]. Nat Rev Neurosci, 5(10), 793-807.
Toledo-Rodriguez, M., Blumenfeld, B., Wu, C., Luo, J., Attali, B., Goodman, P., et al. (2004). Correlation maps allow neuronal electrical properties to be predicted from single-cell gene expression profiles in rat neocortex. Cereb Cortex, 14(12), 1310-1327.
Wang, Y., Toledo-Rodriguez, M., Gupta, A., Wu, C., Silberberg, G., Luo, J., et al. (2004). Anatomical, physiological and molecular properties of Martinotti cells in the somatosensory cortex of the juvenile rat. J Physiol, 561(Pt 1), 65-90.
2002
Maass, W., Legenstein, R., & Markram, H. (2002). A New Approach towards Vision Suggested by Biologically Realistic Neural Microcircuit Models. In H. Bülthoff, C. Wallraven, S.-W. Lee & T. Poggio (Eds.), Biologically Motivated Computer Vision (Vol. 2525, pp. 1-6): Springer Berlin / Heidelberg.
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